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Additional Documents

Annotated Bibliography Outline

  • title
  • begin with CSE citation

(must be alphabetical order) 

  • evaluation / how it will be used in the lit review 
  • citation 
  • evaluation 
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Additional Documents

Literature Review Outline

  1. title
  2. abstract – last to be written
  3. introduction
  • do NOT introduce the 3’ articles (in intro and abstract)***
  • introduce the topic — background information; define key terms; why is the topic important?; the purpose of the literature review; briefly discuss the organization strategy; THESIS — END.
  • Thesis (Last Sentence of Intro) 
  • Current research demonstrates xyz may xyz
  • current research indicates that the mediterranean diet helps prevent dry eyes 
  • current research is inconclusive 
  1. analysis – use heading to subheadings —> specific to the topic 

-May begin with a history, if too long to be included in the Introduction, even if this is not the primary organizational strategy. 

-Organize based on the purpose of the review.

-Cluster or group the articles.

-Use headings, and possibly subheadings, for sections organized based on similarities, different theories, etc. 

  1. conclusion — restate claim and thesis. making summarize and make connections in order to tie together the points. questions that make come out of these studies that might inspire future research. looking over some limitations in these articles.
  2. references (regular citations) 
  • compare different theories / perspectives 
  • compare the results
  • compare methodology 
  • historical development 

Direct Citations 

  • name is in sentence (year)

Indirect Citations

  • (name, year)
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Additional Documents

Peer Editing

Peer Editing Worksheet—Literature Review

Name of Reviewer: Diana Caballero

Qirat Shahid

  1. Is the title informative and specific?

    Yes
  • Are section headings used effectively? Does the organization seem logical?

    Yes




  • Does the review synthesize the articles or is it just a summary? Give an example.

    The review has summary but there also is a comparing and contrasting. All the articles have in common that Dry Eye symptoms can be reduced with the Mediterranean Diet alongside different solutions as well. Such as exercise or consuming other vitamins.
  • Does the introduction move from general to specific and include relevant history and key terms?
    What is the thesis? Is it the main point or finding of the lit review?

    yes, the introduction includes the symptoms of dry eyes as well as who is affected the most by it. There is not much history behind it which can be incorporated. The thesis states that the Mediterranean diet helps improve dry eyes symptoms. It is the main finding of the lit review.



  • Are there many grammar, spelling, or punctuation mistakes? Are “you” and “I” pronouns avoided? List a few examples.

    there are some grammatical mistakes such as “specially” and some other words that are misspelled. However, pronouns are avoided.



  • Are in-text citations (and References page) in correct CSE name-year style?


in-text citations are correct; however, the references page needs some revising


Categories
Additional Documents

Peer Editing

Reviewer: Qirat Shahid

For: Diana

Peer Editing Worksheet—Literature Review

Name of Reviewer:

1. Is the title informative and specific?

Yes, The title is informative and specific.

2. Are section headings used effectively? Does the organization seem logical?

Yes the section heading used effectively like Hybridization Processes within Two Different Insect Species, Plants and Animals Undergoing Hybridization due to Climate Change and Development of Plants and Animals due to Climatic Changes. She does have one subheading like Differences in Methods. But I think abstractly. She should put the heading as abstract. The organization seem logical because it fit together.

3. Does the review synthesize the articles or is it just a summary? Give an example.

The review synthesized the articles by talking about different and similar in methods that the three articles have. For example in subheading Differences in Methods

​Plants are also organisms that are affected by climatic changes as much as animals are as well. They are living beings and any slight change in their environment may affect their wellbeing. Two Eucalyptus plants, E. risdonii and E. amygdalina, were grown separately using two different genome sequences for each plant (Pfeilsticker TR et. al, 2022). A different method had to be used in order to administer the effect an admixture of genetics would pose on the development on the Eucalyptus plant. Similarly, to the argus butterfly analysis, there were two subspecies of Eucalyptus used as subjects for the experiment in order to make a comparison. However, this experiment had to be conducted on a long-term span. 

4. Does the introduction move from general to specific and include relevant history and key terms? 

The introduction moved from general to specific but it did not  include relevant history and key terms .

What is the thesis? Is it the main point or finding of the lit review?

Current research indicates that climate change is the reason there have been crossovers in multiple species of organisms which in the long run reduce genetic diversity. Yes it is the main point or finding of the lit review.

5. Are there many grammar, spelling, or punctuation mistakes? Are “you” and “I” pronouns avoided? List a few examples.

There are not many grammar, spelling, or punctuation mistakes or “you” or “I”. It is very formal for example Plants are also organisms that are affected by climatic changes as much as animals are as well. They are living beings and any slight change in their environment may affect their wellbeing. 

6. Are in-text citations (and References page) in correct CSE name-year style?

Yes there is in-text citations and References page) in correct CSE name-year style.

Categories
Literature Review

Influence of Climate Change on Earth’s Organisms: A Literature Review

Abstract

         This review will discuss the effects of climatic changes on genetic variability in multiple species including insects and plants. It is the process of hybridization where subspecies reproduce amongst each other. This usually occurs when there is an overlap between two different populations. These overlapping situations are caused by climatic changes. However, it is crucial to consider that the growth in plants is distinct from the growth of an animal which produce contrasting results when being studied. Overall, the species within these studies undergo endangerment as well as a decrease in genetic variability.

Climate Change and Organisms

As climate continues to rise across the Earth, it also continues to affect the environment. Gradually progressing into more severe conditions since not enough efforts are made to put a halt to this issue. Many organisms are struggling to thrive under these conditions. Therefore, to survive and preserve their existence for future generations it has been seen that organisms hybridize. Hybridization is the process in which two distinct species of organisms combine in reproduction, producing a mix of both species. It is crucial to study these frequent processes occurring in several species since it demotes genetic variability. Not only that but it advances the endangerment of the species participating in these processes. This review will capture the effect climate change exudes on the cross-reproduction in animals and plants as well. The review will include analysis of the similarities in studies done on insects, a contrast in methods of the study done on plants and insects, and lastly a comparison between the results of all the studies. Current research indicates that climate change is the reason there have been crossovers in multiple species which in the long run reduce genetic diversity.

Hybridization Processes within Two Different Insect Species

         Hybridization is not new. It has been an action known to organisms to reproduce and maintain their species alive whenever there has been a decrease in populations. With a rise of severe climatic changes throughout the world, there has been a rapid decrease of many species as well. Furthermore, as the populations of some organisms begin to dwindle hybridization is triggered amongst multiple organisms to maintain their survival. It is an ongoing issue in the environment as climate change continues to spiral out of control. Argus butterflies and Damselflies were the subjects of study. Both insects were studied with the same intentions of identifying the role of hybridization in a setting where climatic changes was the threat. In argus butterflies it was determined that these species already underwent through hybridization, prior to the current hybridization, which leads to a minor genetic difference between northern argus butterflies and southern argus butterflies (Mallet J et. al, 2011). These subjects differentiate from the damselflies since they are species that are individual from each other. Not once have they crossbred which leaves room for more accurate and significant results rather than the butterflies. The damselflies have original genetics and are completely different from another subspecies of damselflies. Therefore, it must be a normal interaction for northern and southern argus butterflies to interbreed since they have done so in the past, prior to climate change. Increasing climatic changes pushed these two subspecies of butterflies to interbreed again. In damselflies, about forty subspecies were prone to be affected by the rising climatic changes as well as to have their genetic composure diminished (Nava-Bolanos A et. al, 2019). Climate change has disrupted migration patterns for these species which is what has caused an overlap in certain areas where they live. Overlapping environments is what primarily causes interbreeding in subspecies that had never met. Climate change poses a threat to damselflies and argus butterflies’ genetic variation. Considering the northern and southern argus butterflies are related, it poses a much higher risk for their genetic make-up. The few differences these two subspecies have could be extinguished. Implying that a subspecies of argus butterflies will go extinct if climate change continues to occur. Damselflies had a larger sample population which offered more representation than argus butterflies, encouraging stronger outcomes. 97 pairs of the species were found at higher risk of intertwining with each other due to the probability of sharing the same habitat (Nava-Bolanos A et. al, 2019).

Plants and Animals Undergoing Hybridization due to Climate Change

Differences in Methods

         Plants are also organisms that are affected by climatic changes as much as animals are. Two Eucalyptus plants, E. risdonii and E. amygdalina, were grown separately using two different genome sequences for each plant (Pfeilsticker TR et. al, 2022). A different method had to be used to administer the effect an admixture of genetics would pose on the development of the Eucalyptus plant. Similarly, to the argus butterfly analysis, there were two subspecies of Eucalyptus used as subjects for the experiment to make a comparison. However, this experiment had to be conducted on a long-term span. The Eucalyptus plants had to be grown from seed since it is from the starting point where manipulations can be made for the growth or changes in the plant. The studies from the insects seemed to be more of an observational study where samples of subjects are taken randomly from an already existing population. Unlike with the Eucalyptus where it started from scratch since genetic sequences had to be altered to stimulate a change. The Eucalyptus captures how hybridization affects the development of the organism and analyzed how climate change produced these effects. It is acknowledged that climate change consistently has threatened various Eucalyptus species throughout series of droughts, excessive rainfalls, and even wildfires. These events give different ways for Eucalyptus to thrive which in some cases can lead to an admixture of species. This has mostly been seen in animals such as Damselflies and the argus butterflies. However, not only were the genetic sequences modified in the Eucalyptus, but there were also plenty of weather modifications for each family tree which were placed in different groups. In each group, the families experienced different changes in climate (Pfeilsticker TR et. al, 2022). Therefore, two variables are manipulated to reinforce changes in the development of a Eucalyptus plant. The study contained artificially made and natural plants. The analysis over the insects could not have controlled weather conditions the way it was done with the Eucalyptus plant. Therefore, the insects have a much more natural response to the changes of their surroundings. Whereas the Eucalyptus had plenty of intentional changes within its surroundings for a change in its development. Given the different conditions each plant was placed allows more insights to be done on each individual group of plants since it can produce different reactions or effects towards the plant.

Development of Plants and Animals due to Climatic Changes

         Climate change continues to be an issue in modern society which continues to pose a threat to many species. It is mostly seen through the destruction of habitats due to natural disasters. However, climate change is also responsible for misdirecting certain species’ migration patterns or even their distribution patterns as well. 125 species of Damselflies were found to have separate distribution areas, however, 310 species demonstrated they had overlapping distribution areas due to current climatic changes (Nava-Bolanos A et. al, 2019). Although there are some species that are not at risk of coexisting with other species, there is still a much higher number of species that are at risk on interbreeding and losing their distinctiveness. Overlapping ecosystems decreases genetic variation in subspecies within the same specie which can endanger one another (Mallet J et. al, 2011; Nava Bolanos A et. al, 2019). Brown argus butterflies began to crossbreed due to the overlapping habitat they have repossessed. Climatic changes have driven southern argus butterflies to migrate to the north which is where the northern brown argus butterflies are found. Both are different subspecies. Eucalyptus plants were monitored and consistently had changes made within their environment to enact climate change as well as an overlapping of genetics. Not only that but this study ranged from the years 1990-2019 which allowed for the entire growth of Eucalyptus plants, E. risdonii and E. amygdalina, to be analyzed. A longer span allows researchers to directly encounter significant changes being produced in the development of the plant. 71% of hybrids, 75% pure E. amygdalina and 100% of pure E. risdonii survived since 1990 (Pfeilsticker TR et. al, 2019).

         Modern research demonstrates that climatic changes pose a threat to the individuality each species of organisms withhold genetically. As organisms continue to overlap, their chance of losing genetic variability rises, which furthermore endangers subspecies. Admixtures of genetics also affects the ability for an organism to thrive. Future research may include looking into different methods that can be done to avoid having more species interbreed with each other. Different theories can be tested as well regarding genetics found in organisms, or other variables other than climate change can be tested.

References

Mallet J, Wynne IR, Thomas CD. August 2011. Hybridization and climate change: brown argus butterflies in Britain (Polyommatus subgenus Aricia). Insect Conserv Divers. 4 (3): 192-199. [Accessed: 16 April 2024].

Nava-Bolanos A, Sanchez-Guillen RA, Wellenreuther M, Munoz J, Torres-Pachon M,Novelo-Gutierrez R, Cordoba-Aguilar A, Hassall C, Keyghobadi N. September 2019. Predicting hybridization as a consequences of climate change in damselflies. Insect Conserv Divers. 12 (5): 427-436. [Accessed: 16 April 2024].  

Pfeilsticker TR, Jones RC, Steane DA, Harrison PA, Vaillancourt RE, Potts BM. January 2022. Expansion of the rare Eucalyptus risdonii under climate change through hybridization with a closely related species despite hybrid inferiority. Ann Bot-London. 129 (1): 1-14. [Accessed: 16 April 2024].

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Annotated Bibliography

The effects of Climate Change on Breeding Patterns within Species: An Annotated Bibliography

Mallet J, Wynne IR, Thomas CD. August 2011. Hybridization and climate change: brown argus butterflies in Britain (Polyommatus subgenus Aricia). Insect Conserv Divers. 4 (3): 192-199. [Accessed: 16 April 2024]. http://ccny-proxy1.libr.ccny.cuny.edu/login?url=https://search.ebscohost.com/login.aspx?direct=true&db=a9h&AN=62977129&site=ehost-live

         This study was conducted by James Mallet alongside other contributors. James Mallet is an evolutionary zoologist that specializes on insects and studied at Winchester College. Hence the study’s focus on brown argus butterflies located in Britain. The main concern of this study was the threat climate change poses on genetic diversity between two related species of butterflies that overlap in North England and North Wales. This information will contribute to my literature review since it is closely related to another study but focused on another species of insects. It will also provide insights about climate change causing interbreeding in two different subspecies which generally diminish their genetic variance. However, results change since both northern brown argus and brown argus butterflies are considered to be the same species. Since both populations have a mixture of northern and southern-origin genes and have been hybrid populations. Due to weather concerns due to global warming, warmer temperatures are likely to shift southern populations closer towards the north side which in turn can lead to further interbreeding and less genetic variance or original species.

Nava-Bolanos A, Sanchez-Guillen RA, Wellenreuther M, Munoz J, Torres-Pachon M,Novelo-Gutierrez R, Cordoba-Aguilar A, Hassall C, Keyghobadi N. September 2019. Predicting hybridization as a consequences of climate change in damselflies. Insect Conserv Divers. 12 (5): 427-436. [Accessed: 16 April 2024].  http://ccny-proxy1.libr.ccny.cuny.edu/login?url=https://search.ebscohost.com/login.aspx?direct=true&db=a9h&AN=138392719&site=ehost-live

         This study was conducted on Argia damselflies by Angela Nava‐Bolaños and other colleagues. Angela Nava‐Bolaños has a PhD and studied at the UNAM under the department of Evolutionary Ecology. In the study there were 30 different species studied which provides a variety of outcomes unlike the previous study on the butterflies that studied two related species. This article will be used in my literature review to compare the results with the study done on the brown argus butterflies. Furthermore, these insights also that climate change alters species’ reproduction partners leading to varying species to mix with each other. It was found that over 40 species of damselflies are bound to be affected by the climatic changes causing the insects to be distributed chaotically and lower genetic variation. In both studies, results reveal similar outcomes that genetic variety in species of animals become significantly lower and lower to the point where it might become extinct. However, all the species of damselflies do not indicate any signs of relativeness which make the results of this study much more visible.

Pfeilsticker TR, Jones RC, Steane DA, Harrison PA, Vaillancourt RE, Potts BM. January 2022. Expansion of the rare Eucalyptus risdonii under climate change through hybridization with a closely related species despite hybrid inferiority. Ann Bot-London. 129 (1): 1-14. [Accessed: 16 April 2024].  http://ccny-proxy1.libr.ccny.cuny.edu/login?url=https://search.ebscohost.com/login.aspx?direct=true&db=a9h&AN=154663186&site=ehost-live

         Thais Ribeiro Pfeilsticker and other authors conducted this study about the Eucalyptus risdonii invading the space E. amygdalina through see and pollen dispersal. Pfeilsticker studied at the University of Tasmania and conducts research on population genetics, evolution, and plant science. I intend to use this article in my literature review to differentiate from animals since plants are also a living being that can also be affected by climate change as much as humans and other animals do. In an experiment done on E. risdonii and E. amygdalina they were both grown separately using two different genome sequences for each plant. As they began to grow, the researchers were able to figure out that the current mixed plant was completely inferior to the parent plant. This is due to an epistatic interaction which is the outcome of a gene being modified by one or more various genes. This finding corresponds with the Dobzhansky-Muller model; predicts genetic incompatibilities bound to genetic differentiations. These findings are completely different from the findings in the studies done on the insects which demonstrate how climate change affects each organism differently.

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Lab Report + Poster

Lab Poster

Categories
Lab Report + Poster

Analysis of the relationship between class sizes and student performances in City College Mathematics program

Abstract

CCNY‘s Mathematics Program is infamous for being difficult with some classes boasting a 67% drop/fail rate. Student: teacher ratios and class sizes are often cited in the academic community as a significant determinant of student performance. The goal of this study was to analyze the relationship between class size ratios and student performance. It was predicted that a strong correlation exists between student performance and class size. Surveys were conducted to measure class size and students’ performances in math classes. Recent testing data was procured directly from the math department to assist in this analysis. There was a slight correlation found between class size and student performance from student surveys. A slight correlation was also found from the raw test average data procured from the math department. More research and analysis of the current data is required to produce conclusive results.

Introduction

STEM degree courses have a reputation for being difficult to succeed in. City College of New York’s (CCNY) Mathematics program in particular has an internal reputation of being rigorous and especially unforgiving. This reputation is earned through any number of reasons; be it fast-paced curriculums or impatient teaching styles. One speculated reason that makes math courses difficult is the overwhelming number of students in some classes in comparison to their respective instructors. One study conducted by researchers at CCNY showed that larger classes had an adverse effect on student performance whereas smaller classes had a beneficial effect on student performance (Kara E, et al. 2021). This is possibly because a larger class size will typically result in a reduction of the professor’s ability to cater their curriculum to each student’s natural learning pace. The goal of this study was to determine if there is a correlation between class sizes and student performance and if it is suggestive of a causal link between the two. We predicted that larger class sizes would result in significantly lower student performances. 

Methods

It was decided that student performance would be measured across two vectors: The students’ comfortability with the subject and their actual recorded test scores. 

The first vector was measured via a questionnaire. 41 math students were randomly surveyed using Google Forms in the Cohen Library. They were each asked to identify their math course, and their professors and to estimate their class size. Students were asked to rate their performance in class. They were asked to rate the difficulty of their class, their understanding of the class material, and their performance on the most recent math exam each on a scale from 1 to 5. Finally, the students were given the option to disclose their most recent exam grades, using options ranging from 50-60, 60-70, 70-80, 80-90, and 90-100. Students who were not currently enrolled in a math course were excluded from the survey.

The second vector was measured using test average data collected from the math department.

Average algebra test scores across every class section in Math 190 were collected with permission from the math department along with their corresponding class sizes. Test averages for math 195 and math 201 were not accessible as they were not yet compiled until the end of the semester.

Results

Class sizes were divided into three types: Type-A for classes between 20-39 students, Type-B for classes between 40 and 60 students, and Type-C for classes between 80-200 students.

Type-A

Of all the students surveyed, most test scores collected were of class Type-A. Type-A also contained the most variance in test scores. 36% chose not to give their test scores. The average score range in this group for students who disclosed their test scores was 72.5-82.5%. The average rating for class difficulty was 3.54. The average rating for understanding of material was 3.59. The average rating for test difficulty was 3.32.

Type-B

Of the surveyed students in class type B, 11% chose not to disclose their test scores. The average score range for surveyed students enrolled in medium-sized classes who disclosed their test scores was 62.85-72.85%. The average rating for class difficulty was 3.55. The average rating for material understanding was 3.22. The average rating for test difficulty was 3.11.

Type-C

Of the surveyed students in class type C, 50% chose not to disclose their test scores. The average score range for surveyed students enrolled in large classes who disclosed their test scores was 74-84%. The average rating for class difficulty was 3.6. The average rating for subject comprehension was 3. The average rating for test difficulty was 3.4.

Math Department Data

5 data points depicting the test averages and class sizes of each section in the Math 190 course were provided by the math department.

Figure 1. Scatter plot of all algebra class sizes plotted against their respective test averages. The coordinates of each point from left to right: (33, 97%), (37, 92%), (39, 94%), (42, 86%), (45, 87%)

Discussion

After an analysis of these results, we found that there is no strong correlation shown between class sizes and student performance. Data depicting the relation between class size and surveyed average student performance only showed a slight negative correlation in regards to class difficulty and material comprehension. As for the data provided by the department, recorded test averages plotted against class sizes across algebra showed a slight negative correlation between the two. More research should be conducted to produce more conclusive results. For example, a method should be developed to interview every student of each class to produce a more comprehensive overview of that class’s perceived performance.

Our first approach was to directly survey math professors who teach courses 190, 195, and 201 and to have them compel their students to our general survey questions. After several attempts to make contact with these professors, we decided that this approach was impractical due to the hectic schedules of professors and our research being a potential disruptor for ongoing class sessions, especially of large class sizes. Rating scores on the survey should be upscaled from 1-5 to 1-20 to account for the nuances between each student’s perceived performance. Questions should be added to account for each class’s grading rubric, inquiring about each student’s tendency to participate in class, come to class on time, and complete homework assignments. Data regarding actual test score averages across all sections in precalculus and calculus could not be recorded as they were not yet compiled. The initial surveys used to collect data in the writing class were poorly designed, missing key questions, and as a result, did not collect any useful data pertaining to the goal of this study. Some data points were incomplete, missing crucial information like class size.

There was not much variance in the class sizes for the students surveyed using the general research survey. However, while the research did not show strong correlation between class sizes and performance, there are other factors that may affect the performance, such as engagement with professor, outside factors, etc. Although the initial hypothesis could not be backed up by the data, this is an issue that had been researched before and it is a latent challenge in the academic world, which is worth looking in to in order to improve teaching efficiency. 

References

Kara E, Tonin M,  Vlassopoulos M. Class Size Effects in Higher Education: Differences across STEM and Non-STEM Fields. Economics of Education Review, vol. 82, 2021, pp. 102104-, https://doi.org/10.1016/j.econedurev.2021.102104.

Categories
General Audience Paper

Dolphins’ Diversity Threatened by Climate Change

The ocean is known to be the home of various species of plants and animals, it is an underwater ecosystem that has unique features that wouldn’t be found on land. Among the variety of species found, there are dolphins. These creatures are highly intelligent. This can be seen often when they are performing as a public entertainer at an aquarium, or a place related to the sort. It is impressive to know they can learn tricks such as clapping their fins or jumping out of the water to touch a ball at midair, showcasing it to the world as if it was no biggie. However, with a rise in climatic changes, all living sea creatures have their diversity and mere existence threatened. Therefore, it is crucial to analyze the genetics of these living creatures to measure their similarities and differences in order to learn how to preserve their existence and habitats better. 

         As climate change continues to develop, environments will continue to change severely along with the living organisms encountered in them. For example, the glaciers in Antarctica melting directly impacts living conditions for animals such as penguins and polar bears who are accustomed to the weather. An environmental change further changes the structure of an animal and minimizes diversity. In a recent study, “Population Genomics of the white-beaked dolphin: Implications for conservation amid climate-driven range shifts” done by Marc-Alexander Gose et. al, the author introduces the white-beaked dolphin as the mammal that will have their genetics studied to determine their differences or similarities in genetic structure. The authors take samples of dolphins across different areas with a total of 169. The dolphins genes ranging from 1992-2021. These samples were taken from dolphins that were stranded, by-catch, or biopsied. A stranded dolphin is when it washes up on the shore with a severe injury or deceased by unknown/natural circumstances (Dolphin Research Center). Therefore, the sample can be extracted in a manner that does not affect that dolphins as much since it is either deceased or will receive help for any major injury it may have. According to the NOAA Fisheries association who works in attempts to reduce by-catch, the meaning of by-catch is when fishermen catch animals that they did not want and throw them back into the sea. It may seem harmless to the public eye, but these creatures return to the ocean being injured or die from the fishing gear. However, a biopsy is when a dolphin would have DNA samples taken with a needle. It punctures the skin as many times as necessary until there is a satisfactory amount of the sample. These samples ranged across the North Atlantic (Canada) to Iceland and the Norwegian Barents Sea, as well as other parts along north Europe.

         After assembling all the necessary components for the research, the results from this genetic analyzation gave out interesting outcomes. In order to produce results certain regions were grouped together to form insights about the population structures. Producing a total of four cluster groups of dolphins derived from their genetic origin. There was a strong genetic connection between dolphins from the western Scotland region and Ireland with western Atlantic. Iceland and the Barents Sea as well, even though there is a large distance between these two populations. It was also found that Iceland and Barents Sea dolphins had consistent genetic compositions. This finding resonated with the lengthy migrations that were done often between these two areas. However, western North Atlantic samples were very different from North Sea, western Scotland and Ireland samples. There are also indications of significant mixture between populations from the North Sea, western Scotland, and Ireland. However, these results could be researched more in depth and specifically in order to evaluate each individual group instead of grouping these samples in clusters. Therefore, in future research there could be a larger sample to analyze since the programs require a larger sample to analyze the genetic sequences in these organisms. Within the samples there were little to no differentiations that stood out to researchers. There was also a separate test done to measure the population structure in terms of sex which showed that there was no difference between male and female population structure. Hypothetically believing that there is a lack of sexual intercourse for reproduction. Without reproduction and dolphin populations being threatened by climate change, the stakes are high for dolphins to quickly become another species of endangered animals. These genetic findings in the study can contribute to our understanding as to where these creatures reside and the environment that they thrive in.

         Given the differences and similarities there are between these species of dolphins, us people can have better insights on how exactly to help preserve these amazing creatures in our oceans. It is our responsibility to take care of our environments as well as the flora and fauna that exists which is endangered by the rapid increase of climate change.

References

         Gose M., Humble E., Brownlow A., et. al. 2024 Feb 01. Population genomics of the white-beaked dolphin (Lagenorhynchus albirostris): Implications for conservation amid climate-driven range shifts. Nature; [18 January 2024; 5 March 2024]. https://doi.org/10.1038/s41437-024-00672-7

       NOAA Fisheries. 2016. Understanding Bycatch. [5 March 2024]. https://www.fisheries.noaa.gov/insight/understanding-bycatch#what-is-bycatch?

Categories
Summary/Evaluation + Scholarly Analysis

Scholarly Article Analysis

Diana Caballero

ENGL21003

18 February 2024

Professor Brown

Exploring Genome Sequences in Blue Whales to Determine their History and Population Structure

         In the article by Sushma Jossey and other contributors, “Population Structure and History of North Atlantic Blue Whales Inferred from Whole Genome Sequence Analysis” published on The New York Times on January 6, 2024, describes how the sequence of genes within blue whales have been mixed in with another species of whales, Fin whales. The authors describe the different factors that may have caused this interbreeding. This research was done to demonstrate the imbalance there is in blue whale populations given their genetic structure. Raising ideas and questions for potential research in the future regarding the topic. This research paper is written in the IMRAD format. It will be evaluated on its use of a passive voice, the mix of hedging and non-hedging verbs, and some verb tenses throughout specific sections of this study.

         Since the 19th century, there was an excess of whaling across the oceans of the world. Whaling is the industry of hunting whales for certain body parts that become of high commerce value. Hence the lack of whale populations within the ocean. Since blue whales are larger in body mass they have more to offer, making them a prime target for hunt. The author uses hedging verbs to suggest that the population of Northeast Atlantic and Northwest Atlantic blue whales are diminished and currently evolving. There is also a passive voice being used since the actions of certain studies are mentioned before mentioning the person conducting it. Though there is also some active voicing used since the authors mention that they are the first group to make a de novo assembly of Northwest Atlantic blue whale’s genome. The authors also assert their objectives within the study. This study was conducted with a sample of 26 blue whales taken from the North Atlantic, South Atlantic and Antarctica. Their DNA was taken straight out of the flesh of each whale. In the method’s section of the study, there was a vast use of present verb tenses. In the study, there are seven present-day fin whales from the Norwegian waters that were sampled with the use of biopsy darts. Confirming the recency of the sample relevant to the ongoing study. There were also historical samples done from deceased whales’ bones where their DNA was extracted to compare the results.

         One of the findings from this study was that present-day Blue Whale samples demonstrated a striking hybridization with Fin whales. This is an example of verb tenses in the results section. It is declaring that present blue whales are clearly interbreeding with fin whales due to environmental circumstances among other effects. There are hedging verbs used that suggest a moderate genome differentiation across the samples of the Northeast whales and the Northwest whales. Not only that but more whales are migrating west to east in each generation moving forward rather than the opposite occurring. There is no specific reason or explanation for this occurrence, leaving space for future research to be done on this issue. This is an example of tense verbs in the discussion section. There are also hedging verbs used. The author mentions a study in the discussion section where the Barents Sea has recently gotten warmer, producing a spike in krill populations. This could indicate that the blue whale population can recover. It is not certain whether this possibility can be true suggesting for more future research to be done as well.

         Overall, the study consists of multiple tense verbs since it is comparing two time periods of whale DNA to figure out the difference there is in whale genomes. Not only that but there are also hedging, and non-hedging verbs used. There is some but not much of active/passive voice.

References

         Jossey, S., Haddrath, O., Loureiro, L. et al. Population structure and history of North Atlantic Blue whales (Balaenoptera musculus musculus) inferred from whole genome sequence analysis. Conserv Genet (2024). https://doi.org/10.1007/s10592-023-01584-5